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T3P3
Check the pins.h in the think3dprint3d version for the correct endstop in numbers for RAMPS. Also if it wont connect then have you set the baud rate in Repetier to 115200?
The pins.h file matches the one I as using before (Johann's Marlin). Just changed the baud rate and got it to connect like normal, thanks for the tip!
However, when I home, the problem is even worse. With Johann's Marlin, the carriages will eventually stop after ~2-3 seconds. With the T3P3 version of Marlin, they just keep trying to go up and up.